Teaser

Fast personalized benchmarks and optimization for NGS read mapping.

Start a mapper benchmark now View Example Report Wiki and Download

Find

...a suitable mapper for your next-gen sequencing data in minutes

Identify

...the right mapping quality thresholds for filtering

Optimize

...mapper parameters for accuracy or throughput

Compare

...simulation and real data results


Summary
Teaser analyzes the performance of read mappers based on a data set provided by you. After you enter key characteristics such as read length and reference genome, Teaser will simulate read data including the gold standard alignment. After the simulation, Teaser automatically runs and evaluates each mapper for the selected parameters and summarizes the results in a report. Teaser also supports benchmarking mappers on real data or custom simulations, as well as testing new mappers and custom parameter sets. You can start using Teaser right now using this web application, or download and install it to unlock all advanced features.

If you use Teaser to optimize read mapping in your study, please cite: Smolka M, Rescheneder P, Schatz MC, von Haeseler A and Sedlazeck FJ. Teaser: Individualized benchmarking and optimization of read mapping results for NGS data. Genome Biology 2015, 16:235 (22 October 2015). DOI: 10.1186/s13059-015-0803-1
Update News

New Teaser Version 01/09/2016

Teaser 1.2 is now available and includes various features such as updated visualization, configuration for the segemehl, CUSHAW3, Stampy and Bowtie mappers and improvements in read simulation.

Teaser Published10/22/2015

We are happy to announce the publication of Teaser in Genome Biology! Link to Article

Public Version Available 08/12/2015

Version 1.0f of the Teaser framework is now available for public use on the CIBIV servers.
Recent Benchmarks
Teaser Accession Organism Date Platform Library Read Length
ca5bceb2750f94561e3228836dcdca51H_sapiens2016-12-01 16:42:07illuminasingle-end60
9f620259bd0415e976730570fc337299H_sapiens2016-11-30 12:17:59ion_torrentsingle-end100
b0f80110da279b5880c4c2831fe6e9d1Arabidopsis_thaliana2016-11-29 23:06:13illuminasingle-end60
a43fc4f7d7228b8122a4afa11593f620Saccharomyces_cerevisiae2016-11-28 13:31:42illuminapaired-end100
2e31ad92d40b5422cf44808cbe2b6f2bArabidopsis_thaliana2016-11-28 12:23:03illuminasingle-end60
e4a5b6212ac2ce9abfbe883193ce6939H_sapiens2016-11-25 11:38:33illuminapaired-end120
87a91bbcd3f56328cd09ceb8545f9b71H_sapiens2016-11-25 11:34:47illuminasingle-end120
0403a68f71e51c3bc335ae18fe8ad0a9Arabidopsis_thaliana2016-11-22 21:35:10illuminasingle-end60
1d8d13569ebabfc8c179b91dfd6b174cH_sapiens2016-11-20 12:04:36illuminapaired-end151
84ef64067f683083eaf95346563749adE_coli2016-11-16 23:08:05illuminapaired-end100

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