Teaser

Fast personalized benchmarks and optimization for NGS read mapping.

Start a mapper benchmark now View Example Report Wiki and Download

Find

...a suitable mapper for your next-gen sequencing data in minutes

Identify

...the right mapping quality thresholds for filtering

Optimize

...mapper parameters for accuracy or throughput

Compare

...simulation and real data results


Summary
Teaser analyzes the performance of read mappers based on a data set provided by you. After you enter key characteristics such as read length and reference genome, Teaser will simulate read data including the gold standard alignment. After the simulation, Teaser automatically runs and evaluates each mapper for the selected parameters and summarizes the results in a report. Teaser also supports benchmarking mappers on real data or custom simulations, as well as testing new mappers and custom parameter sets. You can start using Teaser right now using this web application, or download and install it to unlock all advanced features.

If you use Teaser to optimize read mapping in your study, please cite: Smolka M, Rescheneder P, Schatz MC, von Haeseler A and Sedlazeck FJ. Teaser: Individualized benchmarking and optimization of read mapping results for NGS data. Genome Biology 2015, 16:235 (22 October 2015). DOI: 10.1186/s13059-015-0803-1
Update News

New Teaser Version 01/09/2016

Teaser 1.2 is now available and includes various features such as updated visualization, configuration for the segemehl, CUSHAW3, Stampy and Bowtie mappers and improvements in read simulation.

Teaser Published10/22/2015

We are happy to announce the publication of Teaser in Genome Biology! Link to Article

Public Version Available 08/12/2015

Version 1.0f of the Teaser framework is now available for public use on the CIBIV servers.
Recent Benchmarks
Teaser Accession Organism Date Platform Library Read Length
72d3281ff39e05e58ae671ab03271eb3Saccharomyces_cerevisiae2017-03-24 16:19:15illuminapaired-end100
59ea1d66db53d44b5302701594f1ba93Arabidopsis_thaliana2017-03-17 11:10:42illuminapaired-end50
91143dc831a5a82e1ad70e01e6e0da68Arabidopsis_thaliana2017-03-17 10:05:34illuminapaired-end50
1a33f972d7876c3752c4a41e65b30e85D_melanogaster2017-03-16 14:55:32illuminasingle-end50
f5ca669745f1aec988608dfc0b105ee4D_melanogaster2017-03-15 15:15:38illuminasingle-end32
9be3d17507db867e698f8fa5e7744a06E_coli2017-03-15 07:48:32illuminapaired-end60
fa0e2ed63cb6293868a8102b5dffd2ffDanio_rerio2017-03-07 07:05:39illuminapaired-end100
39225db5ff9adf30e1c46cea2e807625Arabidopsis_thaliana2017-03-07 06:37:51illuminapaired-end100
a75838e00801968208f5fdca18079ebeH_sapiens2017-03-05 02:56:20illuminapaired-end75
d7c9a86764873077acf7ab1914b09f2dArabidopsis_thaliana2017-03-03 14:32:16illuminapaired-end150

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