Teaser

Fast personalized benchmarks and optimization for NGS read mapping.

Start a mapper benchmark now View Example Report Wiki and Download

Find

...a suitable mapper for your next-gen sequencing data in minutes

Identify

...the right mapping quality thresholds for filtering

Optimize

...mapper parameters for accuracy or throughput

Compare

...simulation and real data results


Summary
Teaser analyzes the performance of read mappers based on a data set provided by you. After you enter key characteristics such as read length and reference genome, Teaser will simulate read data including the gold standard alignment. After the simulation, Teaser automatically runs and evaluates each mapper for the selected parameters and summarizes the results in a report. Teaser also supports benchmarking mappers on real data or custom simulations, as well as testing new mappers and custom parameter sets. You can start using Teaser right now using this web application, or download and install it to unlock all advanced features.

If you use Teaser to optimize read mapping in your study, please cite: Smolka M, Rescheneder P, Schatz MC, von Haeseler A and Sedlazeck FJ. Teaser: Individualized benchmarking and optimization of read mapping results for NGS data. Genome Biology 2015, 16:235 (22 October 2015). DOI: 10.1186/s13059-015-0803-1
Update News

New Teaser Version 01/09/2016

Teaser 1.2 is now available and includes various features such as updated visualization, configuration for the segemehl, CUSHAW3, Stampy and Bowtie mappers and improvements in read simulation.

Teaser Published10/22/2015

We are happy to announce the publication of Teaser in Genome Biology! Link to Article

Public Version Available 08/12/2015

Version 1.0f of the Teaser framework is now available for public use on the CIBIV servers.
Recent Benchmarks
Teaser Accession Organism Date Platform Library Read Length
ebf504fb99f836f04a405bd763e9fe7dH_sapiens2017-02-23 15:05:47illuminasingle-end100
91f77dcf4e36b55ae0ac3b64dd4e11bcD_melanogaster2017-02-21 17:59:32illuminasingle-end60
4fdf3423c88daa77f96db4caffb0e89dM_musculus2017-02-18 02:29:31illuminasingle-end50
6ca39130787da35bea4099ad57ae3ca7M_musculus2017-02-16 22:06:26illuminasingle-end50
c2db4fb5d163cdae163a83b2fe9ccc6eE_coli2017-02-11 17:19:54illuminasingle-end60
bc5a1a6277e5a62aa44a4f96d366effaH_sapiens2017-02-06 04:54:43illuminapaired-end60
a2da2219a742687fc74365ab1d9aef25M_musculus2017-02-02 18:09:46illuminasingle-end60
fa8ee20a2003001601f1da2213165a36M_musculus2017-01-31 01:38:28illuminasingle-end60
10601b96867a0dba444ff7ab13f16fd9D_melanogaster2017-01-31 01:34:03illuminapaired-end150
f7d28095fd3d75737865af37f4ca92cdM_musculus2017-01-29 21:25:16illuminapaired-end150

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