Teaser

Fast personalized benchmarks and optimization for NGS read mapping.

Start a mapper benchmark now View Example Report Wiki and Download

Find

...a suitable mapper for your next-gen sequencing data in minutes

Identify

...the right mapping quality thresholds for filtering

Optimize

...mapper parameters for accuracy or throughput

Compare

...simulation and real data results


Summary
Teaser analyzes the performance of read mappers based on a data set provided by you. After you enter key characteristics such as read length and reference genome, Teaser will simulate read data including the gold standard alignment. After the simulation, Teaser automatically runs and evaluates each mapper for the selected parameters and summarizes the results in a report. Teaser also supports benchmarking mappers on real data or custom simulations, as well as testing new mappers and custom parameter sets. You can start using Teaser right now using this web application, or download and install it to unlock all advanced features.

If you use Teaser to optimize read mapping in your study, please cite: Smolka M, Rescheneder P, Schatz MC, von Haeseler A and Sedlazeck FJ. Teaser: Individualized benchmarking and optimization of read mapping results for NGS data. Genome Biology 2015, 16:235 (22 October 2015). DOI: 10.1186/s13059-015-0803-1
Update News

New Teaser Version 01/09/2016

Teaser 1.2 is now available and includes various features such as updated visualization, configuration for the segemehl, CUSHAW3, Stampy and Bowtie mappers and improvements in read simulation.

Teaser Published10/22/2015

We are happy to announce the publication of Teaser in Genome Biology! Link to Article

Public Version Available 08/12/2015

Version 1.0f of the Teaser framework is now available for public use on the CIBIV servers.
Recent Benchmarks
Teaser Accession Organism Date Platform Library Read Length
32870fdc0a9e6edb31d69785881d336eH_sapiens2016-10-01 15:02:03illuminasingle-end50
36415420ccffd07c60e2157a5c1f3590H_sapiens2016-09-30 16:03:53illuminapaired-end150
d5792075f5b68a149dec257aaca3ad6dE_coli2016-09-30 15:14:00illuminasingle-end60
cc85ddad6d211b226aa7292c8ea90f5cD_melanogaster2016-09-30 12:49:34illuminasingle-end60
299907212be805eaa120839f83dc6a8cM_musculus2016-09-29 18:52:11illuminasingle-end200
94e24c27c9c9a400d9da387311879093Arabidopsis_thaliana2016-09-29 16:51:16illuminasingle-end76
3282446d5eb55b96615b46a1ea854e0cH_sapiens2016-09-29 16:48:38illuminapaired-end200
d7180a49ca860e5bb0193cc993a4d472D_melanogaster2016-09-29 13:46:39illuminasingle-end60

Copyright © 2015, CIBIV.