Teaser

A tool for fast personalized benchmarks and optimization of NGS read mapping.

Start a mapper benchmark now View Example Report Wiki and Download

Find

...a suitable mapper for your next-gen sequencing data in minutes

Identify

...the right mapping quality thresholds for filtering

Optimize

...mapper parameters for accuracy or throughput

Compare

...simulation and real data results


Summary
Teaser analyzes the performance of read mappers based on a data set provided by you. After you enter key characteristics such as read length and reference genome, Teaser will simulate read data including the gold standard alignment. After the simulation, Teaser automatically runs and evaluates each mapper for the selected parameters and summarizes the results in a report. Teaser also supports benchmarking mappers on real data or custom simulations, as well as testing new mappers and custom parameter sets. You can start using Teaser right now using this web application, or download and install it to unlock all advanced features.

If you use Teaser to optimize read mapping in your study, please cite: Smolka M, Rescheneder P, Schatz MC, von Haeseler A and Sedlazeck FJ. Teaser: Individualized benchmarking and optimization of read mapping results for NGS data. Genome Biology 2015, 16:235 (22 October 2015). DOI: 10.1186/s13059-015-0803-1
Update News

New Teaser Version 01/09/2016

Teaser 1.2 is now available and includes various features such as updated visualization, configuration for the segemehl, CUSHAW3, Stampy and Bowtie mappers and improvements in read simulation.

Teaser Published10/22/2015

We are happy to announce the publication of Teaser in Genome Biology! Link to Article

Public Version Available 08/12/2015

Version 1.0f of the Teaser framework is now available for public use on the CIBIV servers.
Recent Benchmarks
Teaser Accession Organism Date Platform Library Read Length
a407eba77d1867886759553d96c07983Saccharomyces_cerevisiae2016-08-26 23:34:08illuminasingle-end50
7dcc942a5c22a83923894508e1b080fcD_melanogaster2016-08-24 19:39:40illuminasingle-end60
1bebefd98ab80dcb8873bffea141fff5H_sapiens2016-07-27 23:46:57illuminasingle-end60
80bb0cd798fd1934ae4e38c6d9738dd4D_melanogaster2016-07-21 13:01:42illuminapaired-end126
e91b75cde3a54acd6ff34f782bea8e47H_sapiens2016-07-11 11:55:20illuminasingle-end60
9fd0f392f20fbcd0397ce0b3fc1f3b8fD_melanogaster2016-06-21 21:52:55illuminasingle-end100
3560abd9481fadf0ff8aed52f36c5543D_melanogaster2016-06-21 21:48:27illuminasingle-end100
670ab325c92339bd42fa28c88aab96b7D_melanogaster2016-06-21 21:46:37illuminasingle-end100
017f6a11490ef4921261345a575821faD_melanogaster2016-06-21 21:45:39illuminasingle-end100
95fbbfc60ce0a7becbe99e3f56fc0b5eD_melanogaster2016-06-21 21:22:43illuminasingle-end60

Copyright © 2015, CIBIV.